neuropercolation/evaluation/4Layer Resultant 4way Phase Evolution.py

277 lines
12 KiB
Python
Raw Permalink Normal View History

2023-09-30 17:53:06 +00:00
#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Mon Aug 21 14:59:22 2023
2023-12-14 19:49:44 +00:00
@author: timofej
2023-09-30 17:53:06 +00:00
"""
import json
import math as m
import numpy as np
from numpy.linalg import norm
from datetime import datetime
from random import sample as choose
from plot import qtplot
eps_space = list(np.linspace(0.01,0.2,20))
def resultant(sample):
phase_x = [m.cos(ind) for ind in sample]
phase_y = [m.sin(ind) for ind in sample]
return (np.average(phase_x), np.average(phase_y))
phase = np.vectorize(lambda x,y: (m.atan2(y,x)+m.pi)%(2*m.pi)-m.pi)
diff = np.vectorize(lambda x,y: (y-x+m.pi)%(2*m.pi)-m.pi)
H2 = lambda x: -x*m.log2(x)-(1-x)*m.log2(1-x)
extremes = None
maxdt = 300
for dim in [9]:
for eps in eps_space:
path=f'/cloud/Public/_data/neuropercolation/4lay/steps=100100/dim=09/'
try:
with open(path+f"eps={round(eps,3):.3f}_phase_diff.txt", 'r', encoding='utf-8') as f:
phase_diff = json.load(f)
except:
with open(path+f"eps={round(eps,3):.3f}_activation.txt", 'r', encoding='utf-8') as f:
activation = json.load(f)[100:]
osc = list(zip(*activation))
phase_abs = np.array([[np.arctan2(*act[::-1]) for act in osc[i]] for i in range(2)])
phase_diff = diff(phase_abs[0],phase_abs[1])
with open(path+f"eps={round(eps,3):.3f}_phase_diff.txt", 'w', encoding='utf-8') as f:
json.dump(list(phase_diff), f, indent=1)
all_res = norm(resultant(phase_diff))
av_diff = np.arccos(all_res)
try:
with open(path+f"eps={round(eps,3):.3f}_ei.txt", 'r', encoding='utf-8') as f:
ei = json.load(f)
except:
with open(path+f"eps={round(eps,3):.3f}_channels.txt", 'r', encoding='utf-8') as f:
channels = json.load(f)[100:]
ei = [np.sum(cha)*(1-H2(eps)) for cha in channels]
with open(path+f"eps={round(eps,3):.3f}_ei.txt", 'w', encoding='utf-8') as f:
json.dump(ei, f, indent=1)
pha_center = av_diff
pha_dev = m.pi/32
from_sync = lambda i: True if abs(phase_diff[i])<0.08*m.pi else False if 0.42*m.pi<abs(phase_diff[i])<0.58*m.pi else from_sync(i-1) if i>0 else None
to_sync = lambda i: True if abs(phase_diff[i])<0.08*m.pi else False if 0.42*m.pi<abs(phase_diff[i])<0.58*m.pi else to_sync(i+1) if i+1<len(phase_diff) else None
dev_ind = sorted([i for i,val in enumerate(ei[:-maxdt]) if (pha_center-pha_dev)<=abs(phase_diff[i])<=(pha_center+pha_dev)], key = lambda i: ei[i])
dev_00 = [i for i in dev_ind if from_sync(i) and to_sync(i) ]
dev_01 = [i for i in dev_ind if from_sync(i) and to_sync(i) is False]
dev_10 = [i for i in dev_ind if from_sync(i) is False and to_sync(i) ]
dev_11 = [i for i in dev_ind if from_sync(i) is False and to_sync(i) is False]
lens = [len(dev_00),len(dev_01),len(dev_10),len(dev_11)]
#if not extremes:
extremes = [1000]*4 #[l//2 for l in lens]
print(lens)
#print(all_res, av_diff)
# bot_00 = dev_00[:extremes[0]]
# bot_01 = dev_01[:extremes[1]]
# bot_10 = dev_10[:extremes[2]]
# bot_11 = dev_11[:extremes[3]]
top_00 = dev_00[-extremes[0]:]
top_01 = dev_01[-extremes[1]:]
top_10 = dev_10[-extremes[2]:]
top_11 = dev_11[-extremes[3]:]
# bot_res = []
top_res = []
# dev_res = []
tot_res = []
# bot_ph = []
top_ph = []
# dev_ph = []
tot_ph = []
# bot_ei = []
top_ei = []
# dev_ei = []
tot_ei = []
for dt in range(maxdt):
# bot_pha = [[abs(phase_diff[i+dt]) for i in bot_00],
# [abs(phase_diff[i+dt]) for i in bot_01],
# [abs(phase_diff[i+dt]) for i in bot_10],
# [abs(phase_diff[i+dt]) for i in bot_11]]
top_pha = [[abs(phase_diff[i+dt]) for i in top_00],
[abs(phase_diff[i+dt]) for i in top_01],
[abs(phase_diff[i+dt]) for i in top_10],
[abs(phase_diff[i+dt]) for i in top_11]]
# dev_pha = [[abs(phase_diff[i+dt]) for i in dev_00],
# [abs(phase_diff[i+dt]) for i in dev_01],
# [abs(phase_diff[i+dt]) for i in dev_10],
# [abs(phase_diff[i+dt]) for i in dev_11]]
tot_pha = np.abs(phase_diff[dt:dt-maxdt])
# bot_res.append( [norm(resultant(bot_pha[i])) for i in range(4)] )
top_res.append( [norm(resultant(top_pha[i])) for i in range(4)] )
# dev_res.append( [norm(resultant(dev_pha[i])) for i in range(4)] )
tot_res.append( norm(resultant(tot_pha)) )
# bot_ph.append( [phase(*resultant(bot_pha[i])) for i in range(4)] )
top_ph.append( [phase(*resultant(top_pha[i])) for i in range(4)] )
# dev_ph.append( [phase(*resultant(dev_pha[i])) for i in range(4)] )
tot_ph.append( phase(*resultant(tot_pha)) )
# bot_ei.append( [np.average([ei[i+dt] for i in bot]) for bot in [bot_00,bot_01,bot_10,bot_11]] )
top_ei.append( [np.average([ei[i+dt] for i in top]) for top in [top_00,top_01,top_10,top_11]] )
# dev_ei.append( [np.average([ei[i+dt] for i in dev]) for dev in [dev_00,dev_01,dev_10,dev_11]] )
tot_ei.append( np.average(ei[dt:dt-maxdt]) )
if dt%10==0:
print(f'Done dt={dt}')
# bot_res = list(zip(*bot_res))
top_res = list(zip(*top_res))
# dev_res = list(zip(*dev_res))
# bot_ph = list(zip(*bot_ph))
top_ph = list(zip(*top_ph))
# dev_ph = list(zip(*dev_ph))
# bot_ei = list(zip(*bot_ei))
top_ei = list(zip(*top_ei))
# dev_ei = list(zip(*dev_ei))
plotpath = path+'4waymedian/'
qtplot(f'Diachronic resultant sync to sync for dim={dim} with 4 layers',
[np.array(range(maxdt))]*4,
# [bot_res[0], top_res[0], dev_res[0], tot_res],
[top_res[0], cau_res[0]]
['sync to sync bottom {extremes} ei', 'sync to sync top {extremes} ei',
'sync to sync {len(dev_00)} ei', 'Average Resultant'],
x_tag = 'dt',
y_tag = 'concentration',
export=True,
path=plotpath,
filename=f'Diachronic Resultant Norm eps={round(eps,3):.3f} sts dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
close=True)
qtplot(f'Diachronic resultant sync to orth for dim={dim} with 4 layers',
[np.array(range(maxdt))]*4,
[bot_res[1], top_res[1], dev_res[1], tot_res],
['sync to orth bottom {extremes} ei', 'sync to orth top {extremes} ei',
'sync to orth {len(dev_01)} ei', 'Average Resultant'],
x_tag = 'dt',
y_tag = 'concentration',
export=True,
path=plotpath,
filename=f'Diachronic Resultant Norm eps={round(eps,3):.3f} sto dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
close=True)
qtplot(f'Diachronic resultant orth to sync for dim={dim} with 4 layers',
[np.array(range(maxdt))]*4,
[bot_res[2], top_res[2], dev_res[2], tot_res],
['orth to sync bottom {extremes} ei', 'orth to sync top {extremes} ei',
'orth to sync {len(dev_10)} ei', 'Average Resultant'],
x_tag = 'dt',
y_tag = 'concentration',
export=True,
path=plotpath,
filename=f'Diachronic Resultant Norm eps={round(eps,3):.3f} ots dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
close=True)
qtplot(f'Diachronic resultant orth to orth for dim={dim} with 4 layers',
[np.array(range(maxdt))]*4,
[bot_res[3], top_res[3], dev_res[3], tot_res],
['orth to orth bottom {extremes} ei', 'orth to orth top {extremes} ei',
'orth to orth {len(dev_11)} ei', 'Average Resultant'],
x_tag = 'dt',
y_tag = 'concentration',
export=True,
path=plotpath,
filename=f'Diachronic Resultant Norm eps={round(eps,3):.3f} oto dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
close=True)
qtplot(f'Diachronic resultant phase sync to sync for dim={dim} with 4 layers',
[np.array(range(maxdt))]*4,
[bot_ph[0], top_ph[0], dev_ph[0], tot_ph],
['sync to sync bottom {extremes} ei', 'sync to sync top {extremes} ei',
'sync to sync {len(dev_in_ind)} ei', 'Average'],
x_tag = 'dt',
y_tag = 'phase',
export=True,
path=plotpath,
filename=f'Diachronic Resultant Phase eps={round(eps,3):.3f} sts dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
close=True)
qtplot(f'Diachronic resultant phase sync to orth for dim={dim} with 4 layers',
[np.array(range(maxdt))]*4,
[bot_ph[1], top_ph[1], dev_ph[1], tot_ph],
['sync to orth bottom {extremes} ei', 'sync to orth top {extremes} ei',
'sync to orth {len(dev_out_ind)} ei', 'Average'],
x_tag = 'dt',
y_tag = 'phase',
export=True,
path=plotpath,
filename=f'Diachronic Resultant Phase eps={round(eps,3):.3f} sto dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
close=True)
qtplot(f'Diachronic resultant phase orth to sync for dim={dim} with 4 layers',
[np.array(range(maxdt))]*4,
[bot_ph[2], top_ph[2], dev_ph[2], tot_ph],
['orth to sync bottom {extremes} ei', 'orth to sync top {extremes} ei',
'orth to sync {len(dev_in_ind)} ei', 'Average'],
x_tag = 'dt',
y_tag = 'phase',
export=True,
path=plotpath,
filename=f'Diachronic Resultant Phase eps={round(eps,3):.3f} ots dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
close=True)
qtplot(f'Diachronic resultant phase orth to orth for dim={dim} with 4 layers',
[np.array(range(maxdt))]*4,
[bot_ph[3], top_ph[3], dev_ph[3], tot_ph],
['orth to orth bottom {extremes} ei', 'orth to orth top {extremes} ei',
'orth to orth {len(dev_out_ind)} ei', 'Average'],
x_tag = 'dt',
y_tag = 'phase',
export=True,
path=plotpath,
filename=f'Diachronic Resultant Phase eps={round(eps,3):.3f} oto dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
close=True)
# qtplot(f'Diachronic ei for dim={dim} with 4 layers',
# [np.array(range(maxdt))]*4,
# [bot_ei, top_ei, dev_ei, tot_ei],
# ['EI ev of bottom {extremes} ei', 'EI ev of top {extremes} ei',
# 'EI ev of phase filtered ei', 'Average EI'],
# x_tag = 'dt',
# y_tag = 'average ei',
# export=True,
# path=path+'plots/',
# filename=f'Diachronic EI balanced for eps={round(eps,3):.3f} dim={dim} extremes={extremes} roll{pha_dev:.3f}.png',
# close=True)
print(f'Done eps={eps:.3f} with dim={dim} at {datetime.now()}')
# qtplot(f'Resultant and EI evolution for dim={dim} with 4 layers',
# [[0]+eps_space]*2,
# [max(av_ei)*diff_res, av_ei],
# ['Resultant', 'avEI'],
# export=True,
# path=path,
# filename=f'Resultant and EI for dim={dim}.png',
# close=True)