neuropercolation/evaluation/updated_bib_file.bib
2023-09-30 19:53:06 +02:00

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BibTeX

@book{barrat2008,
title={Dynamical Processes on Complex Networks},
author={Barrat, A. and Barth{\'e}lemy, M. and Vespignani, A.},
isbn={9781107377424},
url={https://books.google.pt/books?id=fUAhAwAAQBAJ},
year={2008},
publisher={Cambridge University Press}
}
@article{Varela2001,
title={The brainweb: Phase synchronization and large-scale integration},
author={Francisco J. Varela and Jean-Philippe Lachaux and Eugenio Rodriguez and Jacques Martinerie},
journal={Nature Reviews Neuroscience},
year={2001},
volume={2},
pages={229-239}
}
@article{Carmichael2002,
title={Synchronous Neuronal Activity Is a Signal for Axonal Sprouting after Cortical Lesions in the Adult},
author={S. Thomas Carmichael and M. -F. Chesselet},
journal={The Journal of Neuroscience},
year={2002},
volume={22},
pages={6062 - 6070}
}
@ARTICLE{Otsuka2000,
author = {{Otsuka}, Kenju and {Kawai}, Ryoji and {Hwong}, Siao-Lung and {Ko}, Jing-Yuan and {Chern}, Jyh-Long},
title = "{Synchronization of Mutually Coupled Self-Mixing Modulated Lasers}",
journal = {Phys. Rev. Lett.},
year = {2000},
month = {apr},
volume = {84},
number = {14},
pages = {3049-3052},
doi = {10.1103/PhysRevLett.84.3049},
adsurl = {https://ui.adsabs.harvard.edu/abs/2000PhRvL..84.3049O},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@ARTICLE{Hansel1992,
author = {{Hansel}, D. and {Sompolinsky}, H.},
title = "{Synchronization and computation in a chaotic neural network}",
journal = {Phys. Rev. Lett.},
keywords = {87.10.+e, 05.45.+b, General theory and mathematical aspects},
year = 1992,
month = feb,
volume = {68},
number = {5},
pages = {718-721},
doi = {10.1103/PhysRevLett.68.718},
adsurl = {https://ui.adsabs.harvard.edu/abs/1992PhRvL..68..718H},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@ARTICLE{Glass2001,
author = {{Glass}, Leon},
title = "{Synchronization and rhythmic processes in physiology}",
journal = {Nature},
year = 2001,
month = mar,
volume = {410},
number = {6825},
pages = {277-284},
doi = {10.1038/35065745},
adsurl = {https://ui.adsabs.harvard.edu/abs/2001Natur.410..277G},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
@article{BIEBERICH2002145,
title = {Recurrent fractal neural networks: a strategy for the exchange of local and global information processing in the brain},
journal = {Biosystems},
volume = {66},
number = {3},
pages = {145-164},
year = {2002},
issn = {0303-2647},
doi = {https://doi.org/10.1016/S0303-2647(02)00040-0},
url = {https://www.sciencedirect.com/science/article/pii/S0303264702000400},
author = {Erhard Bieberich},
keywords = {Networks, Fractal, Brain, Mind, Consciousness, Neuron},
abstract = {The regulation of biological networks relies significantly on convergent feedback signaling loops that render a global output locally accessible. Ideally, the recurrent connectivity within these systems is self-organized by a time-dependent phase-locking mechanism. This study analyzes recurrent fractal neural networks (RFNNs), which utilize a self-similar or fractal branching structure of dendrites and downstream networks for phase-locking of reciprocal feedback loops: output from outer branch nodes of the network tree enters inner branch nodes of the dendritic tree in single neurons. This structural organization enables RFNNs to amplify re-entrant input by over-the-threshold signal summation from feedback loops with equivalent signal traveling times. The columnar organization of pyramidal neurons in the neocortical layers V and III is discussed as the structural substrate for this network architecture. RFNNs self-organize spike trains and render the entire neural network output accessible to the dendritic tree of each neuron within this network. As the result of a contraction mapping operation, the local dendritic input pattern contains a downscaled version of the network output coding structure. RFNNs perform robust, fractal data compression, thus coping with a limited number of feedback loops for signal transport in convergent neural networks. This property is discussed as a significant step toward the solution of a fundamental problem in neuroscience: how is neuronal computation in separate neurons and remote brain areas unified as an instance of experience in consciousness? RFNNs are promising candidates for engaging neural networks into a coherent activity and provide a strategy for the exchange of global and local information processing in the human brain, thereby ensuring the completeness of a transformation from neuronal computation into conscious experience.}
}
@incollection{Chalmers2000,
title = {What is a Neural Correlate of Consciousness?},
booktitle = {Neural Correlates of Consciousness},
author = {David J. Chalmers},
publisher = {MIT Press},
year = {2000},
editor = {Thomas Metzinger}
}
@inproceedings{Crick1990,
title={Towards a neurobiological theory of consciousness},
author={Crick, Francis and Koch, Christof},
booktitle={Seminars in the Neurosciences (Vol.2)},
year={1990},
organization={Saunders Scientific Publications}
}
@article{Hidaka2018,
doi = {10.1371/journal.pone.0201126},
author = {Hidaka, Shohei AND Oizumi, Masafumi},
journal = {PLOS ONE},
publisher = {Public Library of Science},
title = {Fast and exact search for the partition with minimal information loss},
year = {2018},
month = {09},
volume = {13},
url = {https://doi.org/10.1371/journal.pone.0201126},
pages = {1-14},
number = {9},
}
@Article{Mediano2019,
AUTHOR = {Mediano, Pedro A.M. and Seth, Anil K. and Barrett, Adam B.},
TITLE = {Measuring Integrated Information: Comparison of Candidate Measures in Theory and Simulation},
JOURNAL = {Entropy},
VOLUME = {21},
YEAR = {2019},
NUMBER = {1},
ARTICLE-NUMBER = {17},
URL = {https://www.mdpi.com/1099-4300/21/1/17},
ISSN = {1099-4300}
}
@incollection{ENGEL2016,
title = {Chapter 3 - Neuronal Oscillations, Coherence, and Consciousness},
editor = {Steven Laureys and Olivia Gosseries and Giulio Tononi},
booktitle = {The Neurology of Conciousness (Second Edition)},
publisher = {Academic Press},
edition = {Second Edition},
address = {San Diego},
pages = {49-60},
year = {2016},
author = {Andreas K. Engel and Pascal Fries}}
@article{FRIES2015,
title = {Rhythms for Cognition: Communication through Coherence},
journal = {Neuron},
volume = {88},
number = {1},
pages = {220-235},
year = {2015},
author = {Pascal Fries}
}
@article{OIZUMI2014,
author = {Oizumi, Masafumi AND Albantakis, Larissa AND Tononi, Giulio},
journal = {PLOS Computational Biology},
publisher = {Public Library of Science},
title = {From the Phenomenology to the Mechanisms of Consciousness: Integrated Information Theory 3.0},
year = {2014},
month = {05},
volume = {10},
pages = {1-25},
number = {5}
}
@article{DOERIG2019,
title = {The unfolding argument: Why IIT and other causal structure theories cannot explain consciousness},
author = {Doerig, Adrien and Schurger, Aaron and Hess, Kathryn and Herzog, Michael H.},
journal = {Consciousness and Cognition},
volume = {72},
year = {2019}
}
@book{BARRAT2008,
title={Dynamical Processes on Complex Networks},
author={Barrat, A. and Barth{\'e}lemy, M. and Vespignani, A.},
year={2008},
publisher={Cambridge University Press}
}
@article{Tononi2004,
title={An information integration theory of consciousness},
author={Giulio Tononi},
journal={BMC Neuroscience},
year={2004},
volume={5},
pages={42 - 42}
}
@article{Rezaei2020,
author = {Rezaei, Hedyeh AND Aertsen, Ad AND Kumar, Arvind AND Valizadeh, Alireza},
journal = {PLOS Computational Biology},
publisher = {Public Library of Science},
title = {Facilitating the propagation of spiking activity in feedforward networks by including feedback},
year = {2020},
month = {08},
volume = {16},
pages = {1-27},
number = {8}
}
@book{BARRAT2008,
title={Dynamical Processes on Complex Networks},
author={Barrat, A. and Barth{\'e}lemy, M. and Vespignani, A.},
year={2008},
publisher={Cambridge University Press}
}
@ARTICLE{LLINAS2014,
AUTHOR={Llinás, Rodolfo R.},
TITLE={Intrinsic electrical properties of mammalian neurons and CNS function: a historical perspective},
JOURNAL={Frontiers in Cellular Neuroscience},
YEAR={2014}
}
@article{Mayner2018,
author = {Mayner, William G. P. AND Marshall, William AND Albantakis, Larissa AND Findlay, Graham AND Marchman, Robert AND Tononi, Giulio},
journal = {PLOS Computational Biology},
publisher = {Public Library of Science},
title = {PyPhi: A toolbox for integrated information theory},
year = {2018},
month = {07},
volume = {14},
pages = {1-21},
number = {7}
}
@article{Hahn2014CommunicationTR,
title={Communication through Resonance in Spiking Neuronal Networks},
author={Gerald Hahn and Alejandro F. Bujan and Yves Fr{\'e}gnac and Ad Aertsen and Arvind Kumar},
journal={PLoS Computational Biology},
year={2014},
volume={10}
}
@article{Fries2005AMF,
title={A mechanism for cognitive dynamics: neuronal communication through neuronal coherence},
author={Pascal Fries},
journal={Trends in Cognitive Sciences},
year={2005},
volume={9},
pages={474-480},
url={}
}
@book{neuroscience6th,
title = {Neuroscience},
edition = {Sixth},
editor = {Purves, Dale and Augustine, George J. and Fitzpatrick, David and Hall, William C. and LaMantia, Anthony-Samuel and Mooney, Richard D. and Platt, Michael L. and White, Leonard E.},
year = {2017},
publisher = {Sinauer Associates},
address = {Sunderland, MA},
isbn = {9781605353807},
pages = {960},
month = {October 12},
}
@article{Bennett2020AnAA,
title={An Attempt at a Unified Theory of the Neocortical Microcircuit in Sensory Cortex},
author={Max Bennett},
journal={Frontiers in Neural Circuits},
year={2020},
volume={14},
url={}
}
@article{vanKerkoerle2014AlphaAG,
title={Alpha and gamma oscillations characterize feedback and feedforward processing in monkey visual cortex},
author={Timo van Kerkoerle and Matthew W. Self and Bruno Dagnino and Marie-Alice Gariel-Mathis and Jasper Poort and Chris van der Togt and Pieter R. Roelfsema},
journal={Proceedings of the National Academy of Sciences},
year={2014},
volume={111},
pages={14332 - 14341},
url={}
}
@article {Westerberg2022,
article_type = {journal},
title = {Laminar microcircuitry of visual cortex producing attention-associated electric fields},
author = {Westerberg, Jacob A and Schall, Michelle S and Maier, Alexander and Woodman, Geoffrey F and Schall, Jeffrey D},
editor = {Ray, Supratim and Baker, Chris I and Luck, Steven J and Nandy, Anirvan S},
volume = 11,
year = 2022,
month = {jan},
pub_date = {2022-01-28},
pages = {e72139},
citation = {eLife 2022;11:e72139},
doi = {10.7554/eLife.72139},
url = {https://doi.org/10.7554/eLife.72139},
keywords = {CSD, ECoG, EEG, LFP, N2pc, V4},
journal = {eLife},
issn = {2050-084X},
publisher = {eLife Sciences Publications, Ltd},
}
@inproceedings{Presigny2021MultiscaleMO,
title={Multiscale modeling of brain network organization},
author={Charley Presigny and Fabrizio De Vico Fallani},
year={2021},
url={}
}
@article{Mejas2016FeedforwardAF,
title={Feedforward and feedback frequency-dependent interactions in a large-scale laminar network of the primate cortex},
author={Jorge F. Mej{\'i}as and John D. Murray and Henry Kennedy and Xiao-Jing Wang},
journal={Science Advances},
year={2016},
volume={2},
url={}
}
@article{Rezaei2019FacilitatingTP,
title={Facilitating the propagation of spiking activity in feedforward networks by including feedback},
author={Hedyeh Rezaei and Ad Aertsen and Alireza Valizadeh and Arvind Kumar},
journal={PLoS Computational Biology},
year={2019},
volume={16},
url={}
}
@article{Hahn2014CommunicationTR,
title={Communication through Resonance in Spiking Neuronal Networks},
author={Gerald Hahn and Alejandro F. Bujan and Yves Fr{\'e}gnac and Ad Aertsen and Arvind Kumar},
journal={PLoS Computational Biology},
year={2014},
volume={10},
url={}
}
@article{Jensen2014HumanBO,
title={Human Brain Oscillations: From Physiological Mechanisms to Analysis and Cognition},
author={Ole Jensen and Eelke Spaak and Johanna M. Zumer},
journal={Magnetoencephalography},
year={2014},
url={}
}
@article{Lowet2015InputDependentFM,
title={Input-Dependent Frequency Modulation of Cortical Gamma Oscillations Shapes Spatial Synchronization and Enables Phase Coding},
author={Eric Lowet and M. Roberts and Avgis Hadjipapas and Alina Peter and Jan van der Eerden and Peter de Weerd},
journal={PLoS Computational Biology},
year={2015},
volume={11},
url={}
}